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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6619490_6621907_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6619490 - 6621907

Intron Length:

2418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

CTTTCCCCATTC

Flanking Amino Acid:

LVGGMTRMPKVQQTVQELFG

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

76.8

31.7

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

80.6

0.69

0.8

78.3

29.3

Minor 5ss

38.2

-1.3

3.4

55.2

Minor BPS

46.8

-0.2

2.1

63.2

42.6

Associated Gene:

Gene:

HSPA9

Ensembl Gene ID:

ENSAPLG00000009263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009695

6610397 - 6627943

17547