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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6623973_6624613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6623973 - 6624613

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAGTAT

5'SS Class:

major

3'SS Sequence:

TTTTGTTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

AGTCTGCTAACA

Flanking Amino Acid:

QYIVKEFKRETGVDLTKDNM

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

0.9

74.1

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

76.9

0.6

0.9

77.1

37.1

Minor 5ss

32.3

-2

3.4

45.9

49.3

Minor BPS

45.4

-0.3

2.3

60.61

38.9

Associated Gene:

Gene:

HSPA9

Ensembl Gene ID:

ENSAPLG00000009263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009695

6610397 - 6627943

17547