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Intron Name: Anas_platyrhynchos_platyrhynchos_14_67347_68188_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
67347 - 68188

Intron Length:
842

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAGGAAA

5'SS Class:
major

3'SS Sequence:
GGTTCCCTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAT

U12 Branch Point Sequence:
TTTTCCCTCATG

Flanking Amino Acid:
TAGYEGSLNGYPLISKSASL

Intron Amino Acid Position:
616

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.3
0.48
1.1
68.2
38.2

Major BPS
70
0.5
1.1
71.2
35.2

Major PPT
77.3
0.62
0.9
69.9
36.5

Minor 5ss
34.5
-1.8
3.3
49.4
46.6

Minor BPS
56.9
0.07
2.1
71.93
41.3

Associated Gene:

Gene:
ABLIM3

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

28564 - 68885
40322

28564 - 68885
40322

28337 - 69087
40751

28564 - 68885
40322