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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6746194_6748849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6746194 - 6748849

Intron Length:

2656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TTTATTTTAACA

Flanking Amino Acid:

ELAYALNNFDKQIIVDPSTF

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

28.7

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

84.3

0.77

0.9

81.1

35.2

Minor 5ss

45.3

-0.5

2.8

64.3

39.9

Minor BPS

77.6

0.86

1.1

83.48

30.3

Associated Gene:

Gene:

CTNNA1

Ensembl Gene ID:

ENSAPLG00000008629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047173

6733665 - 6829893

96229

ENSAPLT00000021422

6733665 - 6829893

96229

ENSAPLT00000009083

6733665 - 6828880

95216