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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6818104_6819640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6818104 - 6819640

Intron Length:

1537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAG

U12 Branch Point Sequence:

TGTGAGAAAACT

Flanking Amino Acid:

DQLIAGQSARAIMAQLPQEQ

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

49.4

-0

1.6

48.8

46.3

Major PPT

86.3

0.82

0.7

84.1

23.9

Minor 5ss

31.2

-2.2

3.1

31.4

42.6

Minor BPS

38.6

-0.7

2.5

62.43

Associated Gene:

Gene:

CTNNA1

Ensembl Gene ID:

ENSAPLG00000008629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021422

6733665 - 6829893

96229

ENSAPLT00000009083

6733665 - 6828880

95216

ENSAPLT00000047173

6733665 - 6829893

96229

ENSAPLT00000030403

6784967 - 6829893

44927

ENSAPLT00000023665

6781666 - 6829893

48228