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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6819823_6820585_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6819823 - 6820585

Intron Length:

763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTAGAC

U12 Branch Point Sequence:

AGGAGGTAGACT

Flanking Amino Acid:

MIMMEMTDFTRGKGPLKNTS

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

44.6

-0.3

1.3

38.1

41.7

Major PPT

88.6

0.87

0.7

83.9

31.1

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

36.2

-1

2.4

50.29

43.8

Associated Gene:

Gene:

CTNNA1

Ensembl Gene ID:

ENSAPLG00000008629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023665

6781666 - 6829893

48228

ENSAPLT00000021422

6733665 - 6829893

96229

ENSAPLT00000009083

6733665 - 6828880

95216

ENSAPLT00000047173

6733665 - 6829893

96229

ENSAPLT00000030403

6784967 - 6829893

44927