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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6820692_6829605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6820692 - 6829605

Intron Length:

8914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TGATGTTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTGAT

U12 Branch Point Sequence:

CAGTGGGTAACT

Flanking Amino Acid:

DKLGRTIADHVDSAMSLIQA

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

74.4

36.1

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

66.4

0.37

1.1

62.1

44.2

Minor 5ss

36.9

-1.5

49.2

40.2

Minor BPS

40.2

-0.6

2.8

60.14

49.1

Associated Gene:

Gene:

CTNNA1

Ensembl Gene ID:

ENSAPLG00000008629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030403

6784967 - 6829893

44927