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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6838170_6840026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6838170 - 6840026

Intron Length:

1857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

GCTGACGGACCT

Flanking Amino Acid:

TEQPQAVKKKALFALCSMLR

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

73.7

0.53

0.7

65.5

30.4

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

37.2

-0.8

2.3

54.08

Associated Gene:

Gene:

SIL1

Ensembl Gene ID:

ENSAPLG00000008556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017444

6836349 - 6917058

80710

ENSAPLT00000008892

6836349 - 6917058

80710