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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6840124_6866315_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6840124 - 6866315

Intron Length:

26192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

TGTGTGTGACCT

Flanking Amino Acid:

AAFVLGAALSSNPKVQIEAI

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

0.9

0.6

85.3

Minor 5ss

-1

56.7

47.6

Minor BPS

42.5

-0.4

2.3

64.64

45.8

Associated Gene:

Gene:

SIL1

Ensembl Gene ID:

ENSAPLG00000008556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017444

6836349 - 6917058

80710

ENSAPLT00000008892

6836349 - 6917058

80710