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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6902161_6916938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6902161 - 6916938

Intron Length:

14778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

ACTAAAATATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.2

38.5

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

34.7

-1.7

2.8

35.3

41.4

Minor BPS

37.2

-0.9

1.9

44.85

36.7

Associated Gene:

Gene:

SIL1

Ensembl Gene ID:

ENSAPLG00000008556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017444

6836349 - 6917058

80710

ENSAPLT00000008892

6836349 - 6917058

80710