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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6952972_6953195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6952972 - 6953195

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTAAATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TGTACTTTAACA

Flanking Amino Acid:

HLSQKYKRIKKPEGKPDQKT

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

77.8

0.69

78.2

31.8

Major PPT

74.5

0.55

0.9

71.5

38.1

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

77.4

0.86

1.2

81.06

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039110

6943183 - 6961248

18066

ENSAPLT00000025343

6943183 - 6960829

17647

ENSAPLT00000008509

6943183 - 6959241

16059