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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6978113_6978224_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6978113 - 6978224

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAGGGCCA

5'SS Class:

weak_major

3'SS Sequence:

CCGCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

TGGCCCTCAGGG

Flanking Amino Acid:

RAGSHWGIAALSIVLIVLFA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.2

47.5

42.6

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

69.8

0.45

0.8

35.1

Minor 5ss

32.6

-2

3.6

48.8

46.9

Minor BPS

42.6

-0.7

46.1

Associated Gene:

Gene:

SLC23A1

Ensembl Gene ID:

ENSAPLG00000008074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045292

6974511 - 6978396

3886

ENSAPLT00000040937

6975776 - 6981457

5682

ENSAPLT00000008377

6975776 - 6981451

5676