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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7040130_7041050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7040130 - 7041050

Intron Length:

921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

GGGACCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAT

U12 Branch Point Sequence:

AAAGCCTGACTT

Flanking Amino Acid:

GNKYTAKNGSRAAGLDADCL

Intron Amino Acid Position:

988

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

49.2

-0

1.5

59.7

46.7

Major PPT

60.9

0.25

51.3

39.1

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

47.3

-0.1

1.8

61.37

42.4

Associated Gene:

Gene:

PCDH12

Ensembl Gene ID:

ENSAPLG00000007583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039844

7036795 - 7046022

9228

ENSAPLT00000007870

7036795 - 7046022

9228