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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7041203_7045657_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7041203 - 7045657

Intron Length:

4455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TCACTCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CTTGTTTTCACT

Flanking Amino Acid:

ELETLLEPQAELALKRLTAA

Intron Amino Acid Position:

1039

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

75.5

0.57

0.8

66.2

35.6

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

54.5

0.22

1.9

74.22

43.6

Associated Gene:

Gene:

PCDH12

Ensembl Gene ID:

ENSAPLG00000007583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039844

7036795 - 7046022

9228

ENSAPLT00000007870

7036795 - 7046022

9228