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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7391415_7396081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7391415 - 7396081

Intron Length:

4667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTAAC

U12 Branch Point Sequence:

CGTCGCTTAACC

Flanking Amino Acid:

DQRSGDRPHPTPLRRRMRPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.3

32.6

Major BPS

59.3

0.23

1.3

63.6

40.3

Major PPT

83.4

0.75

0.8

77.3

31.4

Minor 5ss

34.8

-1.7

3.5

49.1

Minor BPS

60.6

0.31

1.9

68.72

42.7

Associated Gene:

Gene:

PCDH1

Ensembl Gene ID:

ENSAPLG00000007472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007747

7352621 - 7396127

43507