Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_7415882_7428793_F

Intron Information:

Intron Rank:

149205

Intron Class:

major

Intron Phase:

Intron Coordinates:

7415882 - 7428793

Intron Length:

12912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTGAAATTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

CTCTCCTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

76.5

38.7

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

70.1

0.45

62.1

43.1

Minor 5ss

33.2

-1.9

2.8

43.4

43.5

Minor BPS

83.5

1.05

1.1

83.03

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021714

7415743 - 7430598

14856