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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7473545_7474089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7473545 - 7474089

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAG

U12 Branch Point Sequence:

AGCTCCGTGATC

Flanking Amino Acid:

LYYLTQVDPRGSLPKWVVNR

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

49.6

-0

1.6

59.7

46.7

Major PPT

82.8

0.74

0.9

77.3

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

49.5

-0

60.22

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027598

7466368 - 7474579

8212

ENSAPLT00000006755

7470674 - 7474579

3906