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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7481482_7481710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7481482 - 7481710

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

CTTTCCTTCCCG

Flanking Amino Acid:

PVPQRPTGKPEVGEPPISPY

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

71.1

0.47

0.8

64.8

30.8

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

44.2

-0.5

3.7

66.67

47.1

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634

ENSAPLT00000037886

7478073 - 7494929

16857