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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7484880_7485108_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7484880 - 7485108

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTGCC

5'SS Class:

major

3'SS Sequence:

GCCATCCCAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

CTTCTCCTAACA

Flanking Amino Acid:

SGWLDKLSPQGNYVFQRRYV

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

66.9

39.9

Major BPS

0.55

71.8

31.4

Major PPT

1.1

49.2

33.1

Minor 5ss

32.4

-2

3.3

Minor BPS

61.4

0.35

1.7

73.2

38.4

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634