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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7485179_7485799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7485179 - 7485799

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

GGTCTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

GCGGGGTGACCC

Flanking Amino Acid:

KNLMYFSSEKESYPKGVIPL

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

74.3

0.55

69.5

41.7

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

31.7

-1.4

2.3

34.8

41.5

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634