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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7485921_7486117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7485921 - 7486117

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCAA

5'SS Class:

major

3'SS Sequence:

CCTCCCCATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GCCCCCTCAGCC

Flanking Amino Acid:

RIFVFRAENEAQRNEWCSTL

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

42.7

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

72.1

0.5

0.9

65.7

29.1

Minor 5ss

36.7

-1.5

39.2

46.1

Minor BPS

-0.2

1.8

53.01

44.1

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006254

7479296 - 7494929

15634

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857