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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7488067_7488336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7488067 - 7488336

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGTTCCTCACAG

Flanking Amino Acid:

LESKRPRNHSGEPGPEGVYN

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

38.3

Major BPS

72.4

0.56

73.5

32.5

Major PPT

78.2

0.64

0.8

72.3

32.5

Minor 5ss

39.1

-1.2

2.9

49.8

46.4

Minor BPS

49.8

-0.1

62.05

45.2

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634