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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7488454_7488540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7488454 - 7488540

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CACCATCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CCAGCACTAACT

Flanking Amino Acid:

RLPGTRKSREDFQRVWCSLE

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

64.5

0.36

65.2

28.2

Major PPT

64.9

0.34

0.9

56.9

32.8

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

46.4

-0.1

62.52

46.9

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634