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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7489389_7489669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7489389 - 7489669

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

GCAGCCTTCATT

Flanking Amino Acid:

REMLLLVEMGRTFYLQGLSR

Intron Amino Acid Position:

1050

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

0.62

1.1

77.2

Major PPT

82.1

0.72

0.9

80.5

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

50.8

0.1

1.9

64.99

45.8

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634