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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7491003_7491177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7491003 - 7491177

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

CTTCCTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTCTCCCCATGC

Flanking Amino Acid:

LIDNYVSIFNIDEDQVSQMD

Intron Amino Acid Position:

1261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

62.3

36.7

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

76.1

0.59

0.9

72.7

Minor 5ss

34.6

-1.8

3.4

46.8

42.1

Minor BPS

40.1

-0.7

2.2

50.79

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634