Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_7491247_7491529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7491247 - 7491529

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTAGGG

5'SS Class:

major

3'SS Sequence:

CCCTCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCAAA

U12 Branch Point Sequence:

TGTGCCACCACG

Flanking Amino Acid:

SLITTWKDTQLSQAGDLIIE

Intron Amino Acid Position:

1284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

53.8

43.6

Major BPS

-0.1

1.1

52.3

30.3

Major PPT

73.9

0.54

0.7

67.7

25.9

Minor 5ss

28.8

-2.4

3.4

39.1

46.1

Minor BPS

42.5

-0.7

2.3

53.42

46.8

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634