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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7491605_7491727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7491605 - 7491727

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCGGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

CCCACCGCAGCT

Flanking Amino Acid:

KLPDCCVTLKVSPTMTAEEL

Intron Amino Acid Position:

1309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

-0.2

1.4

53.5

Major PPT

64.2

0.32

53.9

41.4

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

39.2

-0.7

2.3

52.31

48.2

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634