Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_7492333_7492417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7492333 - 7492417

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGGAGG

5'SS Class:

major

3'SS Sequence:

TCTCTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACACAG

U12 Branch Point Sequence:

GTGGCCACACAG

Flanking Amino Acid:

RQLLLLKEKRSAKPEREWPL

Intron Amino Acid Position:

1435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

47.3

Major BPS

43.5

-0.4

1.4

50.3

35.4

Major PPT

0.61

0.8

68.8

37.2

Minor 5ss

37.3

-1.4

39.5

46.2

Minor BPS

36.5

-1.1

38.6

43.9

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634