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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7493261_7493344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7493261 - 7493344

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGGCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

ACGGTGTGACCC

Flanking Amino Acid:

DWTTSILKAQHDDLRPVIMR

Intron Amino Acid Position:

1496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

71.3

0.48

0.9

64.5

36.5

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

36.4

-1

2.1

40.05

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037886

7478073 - 7494929

16857

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634