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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7493483_7493699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7493483 - 7493699

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

AGGTGCTTATCT

Flanking Amino Acid:

ATMLSANQTLLRLHTRRTLS

Intron Amino Acid Position:

1542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

65.2

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

80.7

0.69

0.8

71.9

Minor 5ss

33.4

-1.9

3.1

41.2

38.9

Minor BPS

52.6

0.16

2.1

71.01

45.7

Associated Gene:

Gene:

ARAP3

Ensembl Gene ID:

ENSAPLG00000005934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034299

7478073 - 7494929

16857

ENSAPLT00000006254

7479296 - 7494929

15634