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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7500658_7500897_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7500658 - 7500897

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

CTCATCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

CTGCCCTCATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.5

32.2

Major BPS

0.5

1.1

71.2

35.2

Major PPT

76.3

0.59

0.8

69.6

31.1

Minor 5ss

38.7

-1.3

49.2

47.3

Minor BPS

-0

1.9

60.05

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020585

7499651 - 7504546

4896

ENSAPLT00000018699

7499651 - 7504546

4896

ENSAPLT00000005868

7500162 - 7504546

4385