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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7526108_7526387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7526108 - 7526387

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTGGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

GCTGTTGTGACT

Flanking Amino Acid:

KYGNYFFPGTGDMYEVGAES

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

74.4

41.9

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

73.5

0.53

41.8

Minor 5ss

47.2

-0.3

2.6

66.5

44.6

Minor BPS

45.5

-0.2

2.1

62.13

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044775

7516055 - 7529855

13801

ENSAPLT00000005278

7516055 - 7529431

13377