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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7526938_7527316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7526938 - 7527316

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTGGGATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

TTGCTTGGGATT

Flanking Amino Acid:

GCFNLSIRGHGECVEYVKSF

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

72.6

0.51

62.4

47.6

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

41.7

-0.5

59.66

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044775

7516055 - 7529855

13801

ENSAPLT00000005278

7516055 - 7529431

13377