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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7527407_7527522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7527407 - 7527522

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCATGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TGTTATTTCATG

Flanking Amino Acid:

GYTVRNVARCWTYETSLLVD

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.9

0.65

0.9

76.9

37.2

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

49.3

-0.2

60.65

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005278

7516055 - 7529431

13377

ENSAPLT00000044775

7516055 - 7529855

13801