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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7528081_7528489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7528081 - 7528489

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTAAGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

TTTTCTCTAAGT

Flanking Amino Acid:

TRIENQNSRQYLDQIRQTIF

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

73.2

0.52

0.9

71.5

33.2

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

65.7

0.57

88.42

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044775

7516055 - 7529855

13801

ENSAPLT00000005278

7516055 - 7529431

13377