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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7574954_7584701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7574954 - 7584701

Intron Length:

9748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGTAAC

U12 Branch Point Sequence:

GCCGGGGTAACT

Flanking Amino Acid:

FSQTQRPGTSGSQNGEEGGA

Intron Amino Acid Position:

831

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

46.7

-0.2

1.4

47.1

44.6

Major PPT

85.4

0.8

0.6

81.6

23.4

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

35.7

-1

2.7

51.24

49.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004903

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005067

7569607 - 7600934

31328

ENSAPLT00000030402

7569607 - 7606365

36759