Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_7625280_7626812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7625280 - 7626812

Intron Length:

1533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

CAAATATCAACA

Flanking Amino Acid:

LGEEADWAAQGRVPLSEGTG

Intron Amino Acid Position:

795

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

32.3

Major BPS

70.2

0.5

72.1

Major PPT

77.5

0.62

0.8

72.3

32.3

Minor 5ss

24.1

-3

3.3

43.4

Minor BPS

45.1

-0.3

1.8

51.69

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004172

7625190 - 7629194

4005