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Intron Name: Anas_platyrhynchos_platyrhynchos_14_7802007_7806831_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7802007 - 7806831

Intron Length:

4825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GCCTTAGGACCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

GAGTCCCTAAAT

Flanking Amino Acid:

MLLNTDLHGHWWYLISPALL

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

55.1

0.12

1.1

47.1

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

57.2

0.31

1.8

72.63

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041417

7791624 - 7806927

15304