Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_7808996_7812499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7808996 - 7812499

Intron Length:

3504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TCTTCTTTGAAT

Flanking Amino Acid:

SIKNEKLEWAIDEDELRKSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

74.6

0.61

1.4

34.5

Major PPT

69.8

0.45

1.1

42.1

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

71.8

0.77

1.3

83.91

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015430

7808796 - 7828127

19332