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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8135309_8135454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8135309 - 8135454

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

CCCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTCTTCCCC

Flanking Amino Acid:

AAPVDLELKKAFTELQAKVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

67.8

0.4

0.7

60.8

21.8

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

46.3

-0.3

3.6

77.35

39.1

Associated Gene:

Gene:

PFDN1

Ensembl Gene ID:

ENSAPLG00000015211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015854

8104904 - 8135487

30584