Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_8165426_8165793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8165426 - 8165793

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGGTCC

5'SS Class:

major

3'SS Sequence:

CCACCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

CCTTGTGTGACA

Flanking Amino Acid:

PGEQPEFLGIREQRLTGLAV

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

60.5

39.2

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

61.4

0.26

0.9

53.5

30.7

Minor 5ss

44.6

-0.6

60.2

44.6

Minor BPS

44.4

-0.4

2.4

56.99

43.4

Associated Gene:

Gene:

SLC4A9

Ensembl Gene ID:

ENSAPLG00000015338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024580

8154359 - 8168053

13695

ENSAPLT00000016029

8154359 - 8168331

13973