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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8211543_8214276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8211543 - 8214276

Intron Length:

2734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

AATGATTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTGTGCTCACTC

Flanking Amino Acid:

ENNHNAGQVDNRSLAEACSD

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

86.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.1

0.52

62.5

47.3

Minor 5ss

49.5

-0

2.5

68.8

35.6

Minor BPS

46.7

-0.2

2.2

61.97

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002480

8179069 - 8257284

78216