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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8221629_8223038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8221629 - 8223038

Intron Length:

1410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TGTTCAGTAAGA

Flanking Amino Acid:

LELVKYLLAAGANVHATTAT

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.3

29.4

Major BPS

0.1

59.7

32.6

Major PPT

80.2

0.68

0.9

73.8

36.9

Minor 5ss

38.2

-1.3

45.5

Minor BPS

47.9

-0.1

2.5

69.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002480

8179069 - 8257284

78216