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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8272405_8277924_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8272405 - 8277924

Intron Length:

5520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TCGCCCCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

ATTCCATCAGTT

Flanking Amino Acid:

PSQRVSTSPVAASAPSNLGQ

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

76.9

0.61

0.8

73.2

31.7

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

47.2

-0.1

69.99

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035502

8264662 - 8281858

17197