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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8288120_8288353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8288120 - 8288353

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

CGTGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GTGTCCCCACAG

Flanking Amino Acid:

ISEAVQAACMVQYQKCLVAA

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.3

40.2

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

69.1

0.43

0.9

61.3

35.1

Minor 5ss

31.4

-2.1

3.3

37.8

42.4

Minor BPS

40.6

-0.8

2.1

46.68

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043251

8285878 - 8288708

2831

ENSAPLT00000028866

8285878 - 8288708

2831

ENSAPLT00000002757

8287726 - 8293469

5744