Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_8289802_8289883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8289802 - 8289883

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTGG

5'SS Class:

major

3'SS Sequence:

CGTGGCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

GCTCATTTATTT

Flanking Amino Acid:

WGVGCNNGRDRDFAFVASDK

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

61.3

45.8

Major BPS

76.3

0.65

67.3

39.3

Major PPT

62.2

0.28

1.1

41.4

Minor 5ss

41.7

-0.9

3.2

55.9

48.3

Minor BPS

47.8

-0

1.7

62.8

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002757

8287726 - 8293469

5744