Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_8291127_8291460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8291127 - 8291460

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGGGAT

5'SS Class:

major

3'SS Sequence:

TCTTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTGCCCTCACCC

Flanking Amino Acid:

ADGEETLQETDCQASVVKHP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

64.3

41.8

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

88.5

0.87

0.6

87.7

22.3

Minor 5ss

-2.3

3.9

49.2

Minor BPS

48.9

-0.1

1.9

59.89

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002757

8287726 - 8293469

5744