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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8311365_8311884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8311365 - 8311884

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TCTTGCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

AGGACCAGCATG

Flanking Amino Acid:

ALEPVPHPFYQWFLKNYAVS

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

66.8

44.5

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

84.3

0.77

0.8

81.1

Minor 5ss

37.3

-1.4

2.7

48.1

41.6

Minor BPS

37.2

-1.1

1.9

37.35

38.5

Associated Gene:

Gene:

SH3TC2

Ensembl Gene ID:

ENSAPLG00000002842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002897

8307351 - 8321640

14290