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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8319461_8320108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8319461 - 8320108

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

AACTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GTATCAGCAACT

Flanking Amino Acid:

TLAARLSIRVGDQLQELIAF

Intron Amino Acid Position:

1153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.5

32.9

Major BPS

63.7

0.34

1.2

41.8

Major PPT

81.7

0.71

0.9

73.3

41.1

Minor 5ss

28.5

-2.5

3.2

31.7

42.6

Minor BPS

46.6

-0.1

2.4

71.65

44.4

Associated Gene:

Gene:

SH3TC2

Ensembl Gene ID:

ENSAPLG00000002842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002897

8307351 - 8321640

14290