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Intron Name: Anas_platyrhynchos_platyrhynchos_14_83347_83882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

83347 - 83882

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCACCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCCCCCTCACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

69.4

0.44

0.8

65.6

29.1

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

49.1

-0

1.9

59.94

45.2

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033199

83218 - 91111

7894

ENSAPLT00000012526

83218 - 91338

8121